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- Crystal structure and activity-based labeling reveal the mechanisms for linkage-specific substrate recognition by deubiquitinase USP9X
- PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICAPaudel, Prajwal Zhang, Qi Leung, Charles Greenberg, Harrison C. Guo, Yusong Chern, Yi-Hsuan Dong, Aiping Li, Yanjun Vedadi, Masoud Zhuang, Zhihao Tong, Yufeng 出版年：2019
- USP9X is a conserved deubiquitinase (DUB) that regulates multiple cellular processes. Dysregulation of USP9X has been linked to cancers and X-linked intellectual disability. Here, we report the crystal structure of the U...
- DNA barcoding South China Sea fishes
- MITOCHONDRIAL DNAWang, Zhong-Duo Guo, Yu-Song Liu, Xue-Mei Fan, Yan-Bo Liu, Chu-Wu 出版年：2012
- We have determined 222 DNA barcode sequences of 95 fish species in 86 genera of 69 families from 15 orders. Fish were captured by trawl from two important fisheries regions in South China Sea: Spratly Islands (Nansha Isl...
- Long-term exposure to bisphenol A and its analogues alters the behavior of marine medaka<i> (Oryzias</i><i> melastigma)</i> and causes hepatic injury
- SCIENCE OF THE TOTAL ENVIRONMENTLi, Xueyou Liu, Yue Chen, Yuebi Song, Xinlin Chen, Xiaotian Zhang, Ning Li, Huichen Guo, Yusong Wang, Zhongduo Dong, Zhongdian 出版年：2022
- Bisphenols (BPA, BPF, and BPAF) are widely present in the aquatic environment and have various adverse effects on aquatic organisms. However, their hepatic toxicity in marine fish is not fully understood. Hence, we exami...
- Morphological Characters and Transcriptome Profiles Associated with Black Skin and Red Skin in Crimson Snapper (<i>Lutjanus erythropterus</i>)
- INTERNATIONAL JOURNAL OF MOLECULAR SCIENCESZhang, Yan-Ping Wang, Zhong-Duo Guo, Yu-Song Liu, Li Yu, Juan Zhang, Shun Liu, Shao-Jun Liu, Chu-Wu 出版年：2015
- In this study, morphology observation and illumina sequencing were performed on two different coloration skins of crimson snapper (Lutjanus erythropterus), the black zone and the red zone. Three types of chromatophores, ...
- Effects of bisphenol AF on growth, behavior, histology and gene expression in marine medaka<i> (Oryzias</i><i> melastigma)</i>
- CHEMOSPHEREChen, Yuebi Chen, Xiaotian Li, Xueyou Liu, Yue Guo, Yusong Wang, Zhongduo Dong, Zhongdian 出版年：2022
- Bisphenol AF (BPAF) is one of the substitutes for bisphenol A (BPA), which has endocrine-disrupting, repro-ductive and neurological toxicity. BPAF has frequently been detected in the aquatic environment, which has been a...
- Structural and functional characterization of ubiquitin variant inhibitors for the JAMM-family deubiquitinases STAMBP and STAMBPL1
- JOURNAL OF BIOLOGICAL CHEMISTRYGuo, Yusong Liu, Qi Mallette, Evan Caba, Cody Hou, Feng Fux, Julia LaPlante, Gabriel Dong, Aiping Zhang, Qi Zheng, Hui Tong, Yufeng Zhang, Wei 出版年：2021
- Ubiquitination is a crucial posttranslational protein modifi- cation involved in a myriad of biological pathways. This modification is reversed by deubiquitinases (DUBs) that deconjugate the single ubiquitin (Ub) moiety ...
- Effects of bisphenols on lipid metabolism and neuro-cardiovascular toxicity in marine medaka larvae
- AQUATIC TOXICOLOGYLi, Xueyou He, Xiaoxu Lin, Xiaona Li, Weihao Gao, Jiahao Zhang, Ning Guo, Yusong Wang, Zhongduo Zhao, Na Zhang, Bo Dong, Zhongdian 出版年：2023
- Bisphenols are environmental endocrine disruptors that have detrimental effects on aquatic organisms. Using marine medaka larvae, this study explored the effects of bisphenol compounds [bisphenol A (BPA), bisphenol S (BP...
- DNA barcoding, phylogenetic relationships and speciation of snappers (genus Lutjanus)
- SCIENCE CHINA-LIFE SCIENCESWang ZhongDuo Guo YuSong Tan Wei Li Lu Tang EnPu Liu ChuWu Liu Yun 出版年：2010
- The phylogenetic relationships of 13 snapper species from the South China Sea have been established using the combined DNA sequences of three full-length mitochondrial genes (COI, COII and CYTB) and two partial nuclear g...
- SMRT Sequencing of the Full-Length Transcriptome of the <i>Coelomactra antiquata</i>
- FRONTIERS IN GENETICSDeng, Aiping Li, Jinpeng Yao, Zebin Afriyie, Gyamfua Chen, Ziyang Guo, Yusong Luo, Jie Wang, Zhongduo 出版年：2021
- Coelomactra antiquata is an important aquatic economic shellfish with high medicinal value. However, because C. antiquata has no reference genome, a lot of molecular biology research cannot be carried out, so the analysi...
- Phylogenetic relationships of south china sea snappers (Genus <i>Lutjanus</i>; family lutjanidae) based on mitochondrial DNA sequences
- MARINE BIOTECHNOLOGYGuo, Yusong Wang, Zhongduo Liu, Chuwu Liu, Li Liu, Yun 出版年：2007
- Phylogenetic relationships of intra- and interspecies were elucidated based on complete cytochrome b (cyt b) and cytochrome c oxidase subunit II (COII) gene sequences from 12 recognized species of genus Lutjanus Bloch in...
- Short-term exposure to norethisterone affected swimming behavior and antioxidant enzyme activity of medaka larvae, and led to masculinization in the adult population
- CHEMOSPHEREDong, Zhongdian Li, Xueyou Chen, Yuebi Zhang, Ning Wang, Zhongduo Liang, Yan-Qiu Guo, Yusong 出版年：2023
- Norethisterone (NET), one of the synthetic progestins, is detected with increasing frequency in the water envi-ronment and distributed in the ocean, with a potential toxicity risk to marine organisms. However, current st...
- Reproductive toxic effects of chronic exposure to bisphenol A and its analogues in marine medaka (<i> Oryzias</i> melastigma )
- AQUATIC TOXICOLOGYChen, Zuchun Li, Xueyou Gao, Jiahao Liu, Yue Zhang, Ning Guo, Yusong Wang, Zhongduo Dong, Zhongdian 出版年：2024
- As awareness of BPA ' s health risks has increased, many countries and regions have implemented strict controls on its use. Consequently, bisphenol analogues like BPF and BPAF are being increasingly used as substitutes. ...
- Weighted Gene Co-Expression Network Analysis of red body color formation of crimson snapper,<i> Lutjanus</i><i> erythropterus</i>
- AQUACULTURE REPORTSXu, Zhenmin Liang, Qiulu Chen, Zizhao Dong, Zhongdian Guo, Yusong Wang, Zhongduo 出版年：2023
- Crimson snapper (Lutjanus erythropterus) is a highly valued economic fish species, with its red body color being a crucial economic characteristic. A systematic study of skin pigmentation could offer insights into the me...
- Mitogenomes of genus <i>Pristipomoides</i>, <i>Lutjanus</i> and <i>Pterocaesio</i> confirm Caesionidae nests in Lutjanidae
- MITOCHONDRIAL DNA PART AGuo, Yusong Bai, Qin Yan, Tao Wang, Zhongduo Liu, Chuwu 出版年：2016
- In this study, the complete mitochondrial genome of Goldbanded jobfish (Perciformes: Lutjanidae: Etelinae: Pristipomoides multidens) was sequenced using long-PCR amplification (Accession No.: KF430626). The mitochondrial...
- Analysis of opsin gene family of Crimson snapper<i> (Lutjanus</i><i> erythropterus)</i>
- GENELiang, Qiulu Afriyie, Gyamfua Chen, Zizhao Xu, Zhenmin Dong, Zhongdian Guo, Yusong Wang, Zhongduo 出版年：2022
- Opsin is a fellow of the G protein-coupled receptors (GPCRs) superfamily. It can be divided into visual and nonvisual opsin according to whether it is directly involved in visual imaging. Opsin plays an important role in...
- Norethindrone alters growth, sex differentiation and gene expression in marine medaka (<i>Oryzias melastigma</i>)
- ENVIRONMENTAL TOXICOLOGYDong, Zhongdian Chen, Yuebi Li, Xueyou Zhang, Ning Guo, Yusong Liang, Yan-Qiu Wang, Zhongduo 出版年：2022
- Norethindrone (NET) is a widely used synthetic progestin, which appears in water environments and threatens aquatic organisms. In this study, marine medaka (Oryzias melastigma) larvae were exposed to 7.6 and 80.1 ng/L NE...
- Complete mitochondrial genome and assembled DNA barcoding analysis of <i>Lutjanus fulgens</i> (Valenciennes, 1830) and its comparison with other <i>Lutjanus</i> species
- ECOLOGY AND EVOLUTIONAfriyie, Gyamfua Wang, Zhongduo Dong, Zhongdian Ayisi Larbi, Christian Asiedu, Berchie Guo, Yusong 出版年：2020
- Lutjanus fulgens(Valenciennes, 1830) is a teleost species classified under the family Lutjanidae which is a native of the Eastern Atlantic Ocean. Though highly commercialized due to its abundance and good taste, the prod...
- Toxic Effects of Bisphenol AF Exposure on the Reproduction and Liver of Female Marine Medaka (<i>Oryzias melastigma</i>)
- ANIMALSLi, Huichen Gao, Jiahao Liu, Yue Ding, Yujia Guo, Yusong Wang, Zhongduo Dong, Zhongdian Zhang, Ning Sinha, Amit Kumar 出版年：2024
- In recent years, bisphenol AF (BPAF) in aquatic environments has drawn attention to its ecological risks. This study aims to investigate the toxic effects of BPAF (188.33 mu g/L) exposure for 30 days on female marine med...
- <i>Vitellogenins</i> and <i>choriogenins</i> are biomarkers for monitoring <i>Oryzias curvinotus</i> juveniles exposed to 17 β - estradiol
- COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY C-TOXICOLOGY & PHARMACOLOGYDong, Zhongdian Li, Xueyou Huang, Shunkai Zhang, Ning Guo, Yusong Wang, Zhongduo 出版年：2020
- The effect of estrogens on Oryzias curvinotus juveniles were investigated by sequencing the transcriptome of O. curvinotus juveniles exposed to 17 beta - estradiol for 24 h. A total of 69,071,524 and 71,210,528 raw reads...
- Sequencing and analysis of the complete mitochondrial DNA of Russell's snapper (<i>L</i>. <i>russellii</i>)
- PROGRESS IN NATURAL SCIENCE-MATERIALS INTERNATIONALGuo, Yusong Wang, Zhongduo Liu, Chuwu Liu, Yun 出版年：2008
- The entire mitochondrial DNA sequence (mitogenome) of Russell's snapper (Lutjanus russellii) was determined using long PCR and primer-walking methodology, representing the first complete mitogenome accessioned for Lutjan...
- Liver comparative transcriptome analysis reveals the mechanism of the Hainan medaka, <i>Oryzias curvinotus</i>, to adapt to salinity
- JOURNAL OF THE WORLD AQUACULTURE SOCIETYDong, Zhongdian Chen, Yuebi Li, Huichen Huan, Zhang Li, Xueyou Zhang, Ning Guo, Yusong Shao, Changwei Wang, Zhongduo 出版年：2023
- To explore the adaptation mechanism of Hainan medaka, Oryzias curvinotus, to salinity, this study performed a histological and RNA-Seq comparative analysis of female medaka liver with different salinities (0, 15 and 30 p...
- <i>Oryzias curvinotus</i> in Sanya Does Not Contain the Male Sex-Determining Gene <i>dmy</i>
- ANIMALSDong, Zhongdian Li, Xueyou Yao, Zebin Wang, Chun Guo, Yusong Wang, Qian Shao, Changwei Wang, Zhongduo 出版年：2021
- Simple Summary dmy is considered to be the male-determining gene in Japanese medaka (Oryzias latipes) and Hainan medaka (Oryzias. curvinotus), both of which have the XX/XY sex-determination system. Here, we found a group...
- The complete mitochondrial genome sequence of <i>Trichiurus nanhaiensis</i> (Perciformes: Trichiuridae)
- MITOCHONDRIAL DNALiu, Xuemei Guo, Yusong Wang, Zhongduo Liu, Chuwu 出版年：2013
- The Naihai cutlassfish (Trichiurus nanhaiensis, Wang and Xu, 1992) is an important commercial fish species in South China Sea, while the taxonomy is still controversial. The 17,060 base pair mitochondrial genome sequence...
- Complete mitogenome of Hainan medaka <i>Oryzias curvinotus</i> (Teleostei: Beloniformes) and transcriptional differences between male and female liver
- MITOCHONDRIAL DNA PART B-RESOURCESWang, Zhongduo Long, Shuisheng Liao, Jian Huang, Chengqin Zhang, Hairui Huang, Shunkai Zhang, Yanping Liu, Li Guo, Yusong 出版年：2017
- In this study, combining the liver transcripts from both sexes by RNA-Seq with DNA sequences by conventional PCRs, we have determined the complete mitogenome of Hainan medaka Oryzias curvinotus collected from the mangrov...
- The first high-quality chromosome-level genome of <i>Eretmochelys imbricata</i> using HiFi and Hi-C data
- SCIENTIFIC DATAGuo, Yusong Tang, Jiao Zhuo, Zixuan Huang, Jingru Fu, Zhenli Song, Jiahao Liu, Min Dong, Zhongdian Wang, Zhongduo 出版年：2023
- Eretmochelys imbricata, a critically endangered sea turtle inhabiting tropical oceans and protected across the world, had an unknown genome sequence until now. In this study, we used HiFi reads and Hi-C technology to ass...
- A high-quality chromosome-level genome assembly of Pacific whiteleg shrimp (<i>Penaeus vannamei</i>)
- SCIENTIFIC DATALiao, Jian Lai, Zhuoxin He, Chuanmeng Li, Gaocong Dong, Zhongdian Guo, Yusong Wang, Zhongduo 出版年：2025
- The Pacific whiteleg shrimp (Penaeus vannamei, synonym Lipopenaeus vannamei) is an important aquaculture species, and its breeding improvement relies heavily on high-quality genomic resources. Here, we sequenced the geno...
- Global warming exacerbates the risk of habitat loss for regional mangrove species
- SCIENTIFIC REPORTSLiao, Jian Li, Gaocong Zhang, Shuiyuan Yang, Yuanfeng Li, Yiyang Dong, Zhongdian Guo, Yusong Wang, Zhongduo 出版年：2025
- Mangroves, as a salt-tolerant evergreen broad-leaved vegetation ecosystem, are widely distributed along the coastlines of tropical and subtropical regions. In the field of ecology, scholars generally agree that climatic ...
- High sequence variation and low population differentiation of mitochondrial control regions of wild Large yellow croaker in South China Sea
- BIOCHEMICAL SYSTEMATICS AND ECOLOGYWang Zhongduo Chen Chong Guo Yusong Liu Chuwu 出版年：2014
- As a highly successful mariculture candidate endemic to China, the wild genetic resource of large yellow croaker (Larimichthys crocea) have collapsed in the northern and central East China Seas, which has impeded the wil...
- Phylogenetics inferred from mitogenome and control region of Silver Sillago, <i>Sillago sihama</i>
- MITOCHONDRIAL DNALiu, Dan Guo, Yusong Wang, Zhongduo Liu, Chuwu 出版年：2012
- Background and aims. Sillago sihama is one of the commercially important fish species and the mitochondrial genome of S. sihama was determined. Results. The mitogenome of S. sihama is 16,599 bp in length. It contains 37 ...
- Norethisterone exposure alters the transcriptome of Marine Medaka (<i>Oryzias melastigma</i>) larvae
- CHEMISTRY AND ECOLOGYLi, Xueyou Lin, Xiaona Chen, Yuebi Wang, Zhongduo Guo, Yusong Afriyie, Gyamfua Zhang, Ning Dong, Zhongdian 出版年：2021
- Norethisterone (NET) is one of the earliest synthetic progestins. Its widespread and long-term use means that NET is often detected on the surface and in groundwater samples, which may cause harm to aquatic organisms. Ma...
